|
Input,
Format, View
|
Analyze
|
Extras
|
Site
Management
|
Q8r1-96 Genome Database
|
|
"MINE"
|
||||
|
Search
& Display
|
||||
|
MINE
Menu
|
description
|
script
name
|
source code
|
|||
|
Create
a brand new sequence entry
|
||||||
|
Edit
a sequence entry
|
||||||
|
Translate
and convert sequences
|
||||||
|
View
all sequence and results files in a simple browser
window
|
||||||
|
View
how many sequence entries are in the database
|
||||||
|
Blast
interface (manager has access to batch blasting from stored
files)
|
||||||
|
Calculate
G+C, sequence length and other features for all sequence
entries in the
database
|
||||||
|
A list
of remote tools for more specialized analysis of individual
sequences
|
||||||
|
Create
complex queries and display information from matching
files
|
||||||
|
This
page. A list of all the scripts in MINE.
|
||||||
|
Collections
of related links with annotation. Can easily be edited to add
new links.
|
||||||
|
The
beginnings of a User's Manual for MINE.
|
||||||
|
A simple | ||||||
|
View
summaries of all visits to MINE scripts (visits to all
scripts are logged)
|
||||||
|
A set
of automated tasks that help the Curator in set-up and
maintenance of
the database.
|
||||||
|
"MINE"
|
||||||
|
The
home page for this specific MINE database.
|
||||||
|
FAQ
about the MINE code
|
||||||
|
MINE
Homepage:
|
http://mariecurie2.imm.ox.ac.uk/MINE/
|
|||||
| Essential Files not in Menu | ||||||
| CGI-MINE.pl |
text
|
|||||
| MINE_Preferences |
text
|
|||||
| MINE_Customization File |
text
|
|||||
| Essential Externals | ||||||
| CGI.pm |
Perl
module
|
|||||
| Optional Externals Required for full functionality | ||||||
| Blastall |
Application
|
|||||
|
Bioperl
|
Perl
package
|
|||||
See the source code for this script: run by MINE: Molecular INformation Explorer. Copyright 2000-2001 Dawn Field. All rights reserved.